vitri F

General Information


DRACP ID  DRACP01844

Peptide Name   vitri F

Sequence  GTLPCGESCVWIPCISSVVGCACKSKVCYKD

Sequence Length  31

UniProt ID  Not available

PubChem CID  Not available

Origin  Viola tricolor

Type  Native peptide

Classification

  

Active ACP Membrane-targeted



Activity Information


Cell Line Disease Cancer Classified Activity Assay Testing Time Literature
BEL-7402 Human papillomavirus-related endocervical adenocarcinoma Carcinoma IC50=5.36 µg/ml SRB assay 48 h 1

Hemolytic Activity  HRBCs: HC50=10.00 μM

Normal (non-cancerous) Cytotoxicity  Not available

Target  Not available

Affinity  Not available

Mechanism  Not available

Nature  Anticancer; Antimicrobial



Structure Information


PDB ID  Not available

Predicted Structure  DRACP01844

Helicity  Not available

Linear/Cyclic  Cyclic

Disulfide/Other Bond  Cys5<--->Cys19; Cys9<--->Cys21; Cys14<--->Cys26

N-terminal Modification  Free

C-terminal Modification  Free

Other Modification  None

Chiral  L



Physicochemical Information


Formula  C138H223N35O42S6

Absent amino acids  FHMNQR

Common amino acids  C

Mass  377216

Pl  7.73

Basic residues  3

Acidic residues  2

Hydrophobic residues  9

Net charge  1

Boman Index  -293

Hydrophobicity  55.48

Aliphatic Index  78.39

Half Life 
  Mammalian: 30 hour
  Yeast: >20 hour
  E.coli: >10 hour

Extinction Coefficient cystines  7365

Absorbance 280nm  245.5

Polar residues  15

Amino acid distribution



Literature Information


Literature 1

Pubmed ID 20580652

Title  Isolation and characterization of cytotoxic cyclotides from Viola tricolor

Doi 10.1016/j.peptides.2010.05.004

Year  2010

Patent

Patent ID Not available

Patent Title  Not available

Other Iinformation  Not available

Other Published ID  Not available




DRACP is developed by Dr.Zheng's team.